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B-Locus Explained: Why Does My Brown Dog Have a Black Coat?

By March 4, 2024September 29th, 2025No Comments

Understanding B-Locus Coat Color Testing

Whether you call it brown, chocolate, liver, or sometimes red in certain breeds, B-Locus can be a confusing coat color test.

Not only are there multiple B-Locus mutations that can contribute to a brown coat color, but some mutations can also appear on the same gene copy, which adds to the confusion.

In this blog, we’ll cover some basic biology of B-Locus mutations and help clarify how they affect coat color.

 

 

Why B-Locus Is Unique

B-Locus is unique compared to other genetic tests we offer.

  • Most other tests involve a single mutation that arose once in one dog and was passed down through breeding.

  • B-Locus has different mutations, which likely occurred separately in different dogs over dog breeding history.

Some B-Locus mutations appear in many breeds, such as the:

  • bc variant

  • bd variant

  • bs variant

Other mutations are breed-specific, such as:

  • ba in Australian Shepherds

  • be in Lancashire Heelers

  • bh in Siberian Huskies

Some breeds have a separate mutation with its own name, like CO-Locus or the Cocoa Locus in French Bulldogs.

No matter the mutation, they all lead to a brown coat color and a brown nose.

How Recessive Mutations Affect Coat Color

Since B-Locus mutations are recessive, a dog must inherit two copies of any B-Locus mutation to express a brown coat.

So how can a dog have two or more mutations but still have a black coat?

  • Sometimes multiple mutations are carried on the same gene copy.

  • Currently, we cannot determine whether mutations are on the same or different gene copy.

  • We can only detect that they are present and must assume they are on different gene copies by default.

We’ve even seen rare cases where a dog carries three B-Locus mutations.

The best way to differentiate whether mutations are on the same or different gene copies is by looking at the dog’s nose color:

  • Brown nose: Mutations are on different gene copies.

  • Black nose: Mutations are on the same gene copy, and the dog should be considered a carrier for breeding purposes.

The following diagram illustrates these two potential situations:

Why Understanding B-Locus Matters

Understanding the complexities of B-Locus coat color testing helps you interpret your genetic test results and make appropriate breeding decisions.

Keep in mind:

  • Different companies may test for some B-Locus variants but not others.

  • Coat color is influenced by other mutations in addition to B-Locus.

We will cover the basics of coat color genetics in a future blog post.

In the meantime, if you have questions, don’t hesitate to reach out. We can help you plan your next breeding to achieve the coat color you want.